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User documentation

  • Receptors and families
    • Receptor pages
    • Family pages
  • Ligands & Bioactivities
    • Ligand coverage
    • Ligands (ChEMBL, GtP, Ki db)
      • Receptor query
      • Ligand query
    • Ligand Info page
    • Endogenous ligand browser
  • Signal proteins
    • Signal protein page
    • GPCR-G protein coupling
    • G protein alignments
    • Interface mapping
  • Sequences
    • Structure-based alignments
    • Phylogenetic trees
    • Similarity search - GPCRdb
    • Similarity search - BLAST
    • Similarity matrix
  • Sequence signature tool
  • Structures
    • Structure browser
    • Refined structures
    • Structure statistics
    • Structure models
    • Structure model validation
    • Structure descriptors
  • Structure comparison
    • Structure comparison tool
    • Structure similarity trees
    • Structure superposition
    • Generic residue numbering (PDB)
  • Structure Constructs
    • Data
    • Construct alignments
    • Construct design tool
    • Experiment browser
    • Truncation & Fusion analysis
    • Mutation analysis
  • Mutations
    • Mutation browser
    • Mutation data submission
      • Type of mutation data
      • How will the mutation data be used?
  • Biased signaling
    • Data submission
      • Submission of biased ligands, balanced reference ligands and pathway effects
      • Biased ligands
      • Balanced ligands (references for pathway-bias)
      • Pathway effects
  • Sites
    • Ligand interactions
    • Site search - manual
    • Site search - from pdb complex
    • Pharmacophore generation
      • Abstract
    • Sodium ion site
  • Generic residue numbering
  • Drugs
    • Drug statistics
    • Drug target mapping
    • Drug browser
  • Sales and prescription (NHS)
    • NHS sales
    • Estimated economic burden
  • Genetic variants
    • Variation statistics
    • Receptor variant browser

Developer documentation

  • Web services
    • API reference
    • Examples
      • Python 3 with requests
      • Python 3 with urllib
      • Python 2 with urllib2
  • Contributing to the project
    • As a programmer
    • As a data curator
  • Local installation
    • For development
    • For internal use
  • Coding style
    • Examples
    • Keep your code clean
  • Recommended git workflow
    • Preface
    • Prerequisites
      • Configuring the upstream repository
    • Workflow
      • Branches
      • Committing
      • Keeping your branch up to date
      • Merging your branch into master
      • Pushing changes to Github and sending a pull request
  • Reload database from dump
  • Building a local database from source data

About GPCRdb

  • About GPCRdb
    • Background and development
  • Contact
  • Contributors of data and development
  • Citing GPCRdb
    • Main reference for GPCRdb
    • Introduction to new users (review)
    • Structure-based alignments and generic residue numbering
    • GPCR drugs and targets
    • GPCR-G protein selectivity
    • Mutation design tool
    • Crystal structure fragment-based pharmacophore models
    • GPCR specific PDF reader
    • Older GPCRdb articles
  • Acknowledgements
    • GPCRdb versions since 2013
    • GPCRdb versions 1993-2013
  • Legal notice
    • Formal
    • Informal
    • Privacy
  • Meetings with GPCRdb representation
    • 2020
    • 2019
    • 2018
    • 2017
    • 2016
    • 2015
    • 2014
    • 2013
  • Linking to GPCRdb
  • External GPCR sites
    • Modeling servers
      • GPCRM
      • scPDB
      • GPCR-SSFE
      • GOMoDo
      • GPCR-ModSim
      • Hybrid MM/CG webserver
    • Others
      • Guide to Pharmacology
      • DrGPCR
      • GPCRladies
GPCRdb
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  • Legal notice
  • Edit on GitHub

Legal notice¶

Formal¶

The GPCRdb server and data suite is a free data distribution system. The data and the server are distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY without even the implied warranty of merchantability or fitness for a particular purpose. The copyright holders and/or other parties provide the data “AS IS”, without warranty of any kind, either expressed or implied. The entire risk as to the quality and performance of the data is with you. Should any data prove defective, you assume the cost of all necessary servicing, repair or correction.

The copyrights for ALL information stored in the GPCRdb belongs to the partners in the GPCRdb project unless stated otherwise. It is free to make unlimited use of the GPCRdb data. The use of data or services provided by the GPCRdb project should be acknowledged the classical way by referring to the articles written by the GPCRdb project partners, and preferably also by mentioning: “We acknowledge the use of the GPCRdb database (https://www.gpcrdb.org).”.

Informal¶

The complete GPCRdb source code is freely available on GitHub under the Apache 2.0 license. This means that the code can be used, modified and distributed for any use (including commercial use), as long as the original license and copyright notice are included with the code, and any significant changes stated.

The data in GPCRdb is freely available under the Creative Commons Attribution 4.0 International license. This means that the data can be copied, redistributed, remixed, transformed and built upon, as long as appropriate credit is giving, a link to the license provided and any changes stated.

Privacy¶

We voluntarily maintain the following privacy rules:

  • We collect usage statistics with Google Analytics
  • We take all possible measures to ensure that all detailed usage will remain secret.
  • Usage data will not be sold or shared with third parties unless for academic purposes, and after we obtained the guarantee that our voluntary privacy rules will be obeyed.
  • Detailed usage data will only be used by the site curators for optimisation and error detection purposes.
  • We reserve the right to publicise, on our site, the names or internet address of any site using this resource, including frequencies of usage and breakdown of usage data types and tools (not individual receptor targets).
  • We reserve the right to occasionally make the usage statistics available to granting organisations but these lists also take the above listed restrictions into account.
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